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Welcome to Flagship Inn, Boothbay Harbor
Welcome to the finest choice in Boothbay Harbor
Maine accommodations.  The Flagship Inn invites you to relax in some of the Boothbay Harbor Region’s most comfortable and reasonable accommodations, all guaranteed by AAA and Mobil guide ratings.  “Best Value” is how our guests describe us!  We are locally owned and operated which allows us to offer the exceptional service of a small inn but the modern amenities of a chain hotel.  Newly renovated throughout, our lodging in Boothbay Harbor, Maine is less than a mile from the Atlantic oceanfront and all downtown Boothbay Harbor has to offer. 

The Flagship Inn features 82 modern guest rooms complete with double or king size beds to make your stay a comfortable one.  Also enjoy our spacious Family Suites for larger families or those extended stay accommodations. 

Our services and amenities at the Flagship Inn are among the very finest.  All of our rooms feature free internet access, Cable TV with four HBO’s, direct dial telephones with voice mail, electronic key locks,  hairdryers, irons and ironing boards.  Enjoy free coffee, juice, tea and a newspaper every morning in our lobby while talking with all of our friendly and knowledgeable staff.  We also have plenty of parking or take a ride around downtown on the trolley that picks up at our doorstep  Handicapped guests are welcome and access is available. The Flagship Inn also features a large outdoor heated pool and spa (New for 2006!) for you to enjoy throughout the late spring and summer season.

The Inn is the perfect place to wrap yourself in the charm of Boothbay Harbor.   Whether a family vacation, casual getaway or comfortable homebase, your experience at the Inn will be one that will bring you back time and time again.  For complete information on our lodging in Boothbay Harbor, Maine please feel free to contact us at (800) 660-5094.